贾善刚

贾善刚，1980年生，博士，副教授，中国农业大学优秀人才。曾在沙特和美国留学近十年，2019年入职中国农业大学，具有10多年从事高通量测序数据分析的经验，具有丰富的理论基础和实践经验，主要涉及基因组拼接、转录组和蛋白质组等多组学研究。近几年开展了大量牧草种子和牧草转基因的工作，尤其是紫花苜蓿。目前项目申请人主持在研国家和省部级子课题3项，是国家牧草产业体系种子岗位专家骨干成员。现为中国草学会副秘书长，Science of the Total Environment、Crop Journal等期刊审稿人，担任草学重要中文核心期刊《草地学报》编委，国际英文期刊《Grasses》编委(Editorial Board)，Frontiers in Plant Sciences专刊编委。已发表相关领域高水平SCI论文60多篇，其中以第一作者或通讯作者（含共同）在Science of the Total Environment (IF^5years=10.237)、Genomics, Proteomics & Bioinformatics (IF^5years=11.12)和Journal of Experimental Botany (IF^5years=7.86)等国际期刊上发表SCI论文30多篇，其中近五年发表23篇SCI文章，参编英文专著2部，参与翻译遗传学专著1部，5个软著。

教学工作

主讲本科生课程“草类基因组学”，主讲硕士生课程“草类植物生物信息学”，主讲硕士生“现代草业生产实践”。

参讲本科生“草业科技文献阅读与论文写作”，参讲本科生“牧草与草坪草种子学”，参讲本科生“草业科学认知实践”，参讲硕士生“牧草与草坪草种子科学与技术”，参讲博士生“种子科学研究进展”。

联系方式

邮箱：shangang.jia@cau.edu.cn。

科研方向

主要科研工作围绕高通量测序和生物信息学，推进草学与基因组学的交叉融合研究，开展草学大数据分析。方向包括草类植物基因组、牧草种子学、草地/发酵宏基因组和生物信息学相关工作。以紫花苜蓿和燕麦等牧草为主要研究对象，通过组学技术，深入解析草类植物基因组进化和变异；开展草地宏基因组学相关工作。

本科生课程：近十年课程数据
研究生课程：近十年课程数据

纵向项目 横向项目

论文题目	刊物名称	收录类别	发表年月	第一作者或全部作者	第一作者单位	排名
A novel flavonoid prenyltransferase gene PcPT11 with broad substrate promiscuity in Psoralea corylifolia L	Industrial Crops & Products		2023			共同通讯作者
Multiple omics datasets reveal significant physical and physiological dormancy in alfalfa hard seeds identified by multispectral imaging analysis	Crop Journal	SCI	2023			共同通讯作者
Deciphering the regulatory network of miR156 in plant architecture and abiotic stress resistance of alfalfa (Medicago sativa) by transcriptome sequencing	Industrial Crops & Products	SCI	2022			共同第一作者
Recent structural variations in the Medicago chloroplast genomes and their horizontal transfer into nuclear chromosomes	Journal of Systematics and Evolution	SCI	2022			共同通讯作者
Seasonal variations in the composition and functional profiles of gut microbiota reflect dietary changes in plateau pikas	Integrative Zoology	SCI	2022			共同第一作者
Spatial variations of root-associated bacterial communities of alpine plants in the Qinghai-Tibet Plateau	Science of the Total Environment	SCI	2022			共同通讯作者
Environment and host species identity shape gut microbiota diversity in sympatric herbivorous mammals	Microbial Biotechnology	SCI	2021			共同通讯作者
Domestication shapes the community structure and functional metagenomic content of the yak fecal microbiota	Frontiers in Microbiology	SCI	2021			共同通讯作者
MLK4-mediated phosphorylation of histone H3T3 promotes flowering by transcriptional silencing of FLC/MAF in Arabidopsis thaliana	Plant Journal	SCI	2021			5
Transcriptomic resources for prairie grass (Bromus catharticus): expressed transcripts, tissue-specific genes, and identification and validation of EST-SSR markers	BMC Plant Biology	SCI	2021			共同通讯作者
Genome-Wide Identification of GRAS Gene Family and Their Responses to Abiotic Stress in Medicago sativa	INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES	SCI	2021			共同通讯作者
The plant secondary compound swainsonine reshapes gut microbiota in plateau pikas (Ochotona curzoniae)	Applied Microbiology and Biotechnology	SCI	2021			共同通讯作者
Non-destructive Identification of Natural Aging Alfalfa Seeds via Multispectral Imaging Analysis	Sensors	SCI	2021			通讯作者
The complete plastid genomes of seven Sargassaceae species and their phylogenetic analysis	Frontiers in Plant Science	SCI	2021			共同通讯作者
Chromosome-scale genome assembly for Chinese sour jujube and insights into its genome evolution and domestication signature	Frontiers in Plant Science	SCI	2021			共同通讯作者
Dietary fiber influences bacterial community assembly processes in the gut microbiota of Durco×Bamei crossbred pig	Frontiers in Microbiology	SCI	2021			共同通讯作者
InMut-Finder: a software tool for insertion identification in mutagenesis using Nanopore long reads	BMC Genomics	SCI	2021			共同通讯作者
Enterotypes of the gut microbial community and their response to plant secondary compounds in plateau pikas	Microorganisms	SCI	2020			共同通讯
Transcriptomic analysis reveals the changes of energy production and AsA-GSH cycle in oat embryos during seed ageing	Plant Physiology and Biochemistry	SCI	2020			3
The Complete Chloroplast Genome Sequencing and Comparative Analysis of Reed Canary Grass (Phalaris arundinacea) and Hardinggrass (P. aquatica)	Plants	SCI	2020			共同通讯
Melatonin Priming Alleviates Aging-Induced Germination Inhibition by Regulating β-oxidation, Protein Translation, and Antioxidant Metabolism in Oat (Avena sativa L.) Seeds	International journal of molecular sciences	SCI	2020			2
Alterations of Gut Microbiome in Tibetan Patients With Coronary Heart Disease	Frontiers in Cellular and Infection Microbiology	SCI	2020			共同通讯
High-quality de novo genome assembly of Kappaphycus alvarezii based on both PacBio and HiSeq sequencing	bioRxiv	SCI	2020			1
Deletion of maize RDM4 suggests a role in endosperm maturation as well as vegetative and stress-responsive growth	Journal of Experimental Botany	SCI	2020			1
Mapping of transgenic alleles in soybean using a nanopore-based sequencing strategy	Journal of Experimental Botany	SCI	2019			共同第一
Evolution of complex thallus alga: genome sequencing of Saccharina japonica	Frontiers in genetics	SCI	2019			共同通讯
Mapping of transgenic alleles in plants using a Nanopore-based sequencing strategy	bioRxiv	SCI	2019			共同第一
An exome-seq based tool for mapping and selection of candidate genes in maize deletion mutants	Genomics, proteomics & bioinformatics	SCI	2018			1
In Vitro Pepsin Digestibility of Cooked Proso Millet (Panicum miliaceum L.) and Related Species from Around the World	Journal of agricultural and food chemistry	SCI	2018			2
Deletion Mutagenesis and Identification of Causative Mutations in Maize	Maize	Book chapter	2018			1
Editing of an alpha-kafirin gene family increases, digestibility and protein quality in sorghum	Plant physiology	SCI	2018			2
A mapping-by-sequencing tool for searching causative genes in mutants	2017 IEEE International Conference on Electro Information Technology (EIT)	IEEE International Conference	2017			1
A population of deletion mutants and an integrated mapping and exome-seq pipeline for gene discovery in maize	G3: Genes, Genomes, Genetics	SCI	2016			1
Proteomic profiling of maize opaque endosperm mutants reveals selective accumulation of lysine-enriched proteins	Journal of experimental botany	SCI	2016			2
Impact of parental Bos taurus and Bos indicus origins on copy number variation in traditional Chinese cattle breeds	Genome biology and evolution	SCI	2015			共同第一
Phylogenomic analysis of transcriptomic sequences of mitochondria and chloroplasts of essential brown algae (Phaeophyceae) in China	Acta Oceanologica Sinica	SCI	2014			1
Phylogenomic analysis of transcriptomic sequences of mitochondria and chloroplasts for marine red algae (Rhodophyta) in China	Acta Oceanologica Sinica	SCI	2014			1
Detection of copy number variations and their effects in Chinese bulls	BMC genomics	SCI	2014			共同第一
Seasonally variable intestinal metagenomes of the red palm weevil (R hynchophorus ferrugineus)	Environmental microbiology	SCI	2013			1
Gene expression analysis of “green tide” alga Ulva prolifera (Chlorophyta) in China	Genes & Genomics	SCI	2011			1
A new insight into cattle's maternal origin in six Asian countries	Journal of Genetics and Genomics	SCI	2010			1
Genetic variation of mitochondrial D-loop region and evolution analysis in some Chinese cattle breeds	Journal of Genetics and Genomics	SCI	2007			1

软件著作 专利