闫军

研究方向为植物基因组学与生物信息学。主要围绕玉米等主粮作物，应用机器学习和人工智能技术开展全基因组选择和智能设计育种模型研究、进行大规模种质资源基因挖掘和调控模式研究、以及新型多组学数据挖掘工具和方法开发。

发表论文

• Xu F, Liu S, Zhao A, Shang M, Wang Q, Jiang S, Cheng Q, Chen X, Zhai X, Zhang J, Wang X#, Yan J#. iFLAS: positive-unlabeled learning facilitates full-length transcriptome-based identification and functional exploration of alternatively spliced isoforms in maize. New Phytologist, 2024, 241(6): 2606-2620. （通迅作者）

• Wang Q, Jiang S, Li T, Qiu Z, Yan J, Fu R, Ma C, Wang X, Jiang S, Cheng Q. G2P Provides an Integrative Environment for Multi-model genomic selection analysis to improve genotype-to-phenotype prediction. Frontiers in Plant Science, 2023, 14:1207139. 

• Yan J, Wang X. Machine learning bridges omics sciences and plant breeding. Trends in Plant Science, 2023, 28(2): 199-210. （第一作者）

• Yan J, Wang X. Unsupervised and semi-supervised learning: the next frontier in machine learning for plant systems biology. Plant Journal, 2022,111: 1527-1538. （第一作者）

• Liu S, Xu F, Xu Y, Wang Q, Yan J, Wang J, Wang X, Wang X. MODAS: exploring maize germplasm with multi-omics data association studies. Science Bulletin, 2022, 67(9): 903-906.

• Yang C*, Yan J*, Jiang S, Li X, Min H, Wang X, Hao D. Resequencing 250 soybean accessions: new insights into genes associated with agronomic traits and genetic networks. Genomics, Proteomics & Bioinformatics, 2022, 20(1): 29-41. （共同一作）

• Yan J, Xu Y, Cheng Q, Jiang S, Xiao Y, Ma C, Yan J B, Wang X. LightGBM: Accelerated genomically designed crop breeding through ensemble learning. Genome Biology, 2021, 22(1): 1-24. （第一作者）

• Xiao Y, Jiang S, Cheng Q, Wang X, Yan J, Zhang R, Qiao F, Ma C, Luo J, Li W, Liu H, Yang W, Song W, Meng Y, Warburton M L, Zhao J, Wang X, Yan J B. The genetic mechanism of heterosis utilization in maize improvement. Genome Biology, 2021, 22(1): 1-29.

• Yan J, Zhai H, Zhu L, Sa S, Ding X. obaDIA: one-step biological analysis pipeline for data-independent acquisition and other quantitative proteomics data. Bioinformatics, 2021, 37(14): 2066-2067. （第一作者）
  

• Yan J, Zou D, Li C, Zhang Z, Song S, Wang X. SR4R: An integrative SNP resource for genomic breeding and population research in rice. Genomics, Proteomics & Bioinformatics, 2020, 18(2): 173–185. （第一作者）

• Jiang S, Cheng Q, Yan J, Fu R, Wang X. Genome optimization for improvement of maize breeding. Theoretical and Applied Genetics, 2020, 133:1491–1502.

• Liang P, Liu S, Xu F, Jiang S, Yan J, He Q, Liu W, Lin C, Zheng F, Wang X, Miao W. Powdery mildews are characterized by contracted carbohydrate metabolism and diverse effectors to adapt to obligate biotrophic lifestyle.Frontiers in Microbiology, 2018, 9:3160.

• He L, Fu S, Xu Z, Yan J, Xu J, Zhou H, Zhou J, Chen X, Li Y, Au K F, Yao H. Hybrid sequencing of full-length cDNA transcripts of stems and leaves in Dendrobium officinale. Genes, 2017, 8(10):257.

• Yan J, Lv S, Hu M, Gao Z, He H, Ma Q, Deng X W, Zhu Z, Wang X. Single-molecule sequencing assists genome assembly improvement and structural variation inference. Molecular Plant, 2016, 9(7): 1085–1087. （第一作者）

• Li A, Liu D, Wu J, Zhao X, Hao M, Geng S,Yan J, Jiang X, Zhang L, Wu J, Yin L, Zhang R, Wu L, Zheng Y, Mao L. mRNA and small RNA transcriptomes reveal insights into dynamic homoeolog regulation of allopolyploid heterosis in nascent hexaploid wheat. Plant Cell, 2014, 26(5): 1878–1900.

• Yan J, Cai Z. Molecular evolution and functional divergence of the cytochrome P450 3(CYP3) family in Actinopterygii (ray-finned fish). PLoS ONE, 2010, 5(12): 1–10. （第一作者）