俞英

俞英，博士，中国农业大学动物科学技术学院教授，博士生导师，国家级一流本科课程《动物育种学》负责人，“大北农”中国农业大学教学名师，中国奶业杰出科技人才。国际家养动物FarmGTEx联合组织成员、第三次全国牛遗传资源普查国家级专家组成员，兼任中国畜牧兽医学会动物遗传育种学分会理事、养牛学分会理事、畜禽遗传标记学分会理事，中国奶业协会育种专业委员会委员。主要研究方向包括动物疾病抗性的遗传基础及表观遗传调控、奶牛乳房炎风险评估及应用、畜禽表观遗传修饰的代间传递规律及在抗病遗传育种中的应用。曾担任2020动物&人类健康与表观遗传调控在线研讨会执行主席，2018国际动物健康及抗病遗传育种研讨会大会秘书长。以第一或通讯（含并列）作者在Nature Genetics、Molecular Biology and Evolution, BMC Biology、JASB、FASEB J、JDS等高水平国际国内期刊发表论文150余篇。担任Small Ruminant Research等期刊编辑。副主编“十一五”国家级规划教材《动物育种学实验教程》，参编《动物重要经济性状基因的分离与应用》、《Livestock Epigenetics》、《10000个科学难题》等专著。获省部级科研奖励7项、国家级及省部级教学奖励5项，授权国家发明专利8项。

主讲本科生专业核心课程:《动物育种学》

主讲研究生课程:《畜禽表观遗传学》、《动物基因组学》、《外文科技文献研读-A》

1.       2020动物&人类健康与表观遗传调控在线研讨会，执行主席

2.       2018国际动物健康及抗病遗传育种研讨会，大会秘书长

3.       中国畜牧兽医学会动物遗传育种学分会，理事

4.       中国畜牧兽医学会养牛学分会，理事

5.       中国畜牧兽医学会畜禽遗传标记学分会，理事

6.       中国奶业协会育种专业委员会，委员

7.       中国农业大学动科院“牛百科”本科生育人平台，主创人之一

8.       担任《Frontiers in Immunology》、《Journal of Animal Science and Biotechnology》、《Journal of Dairy Science》、《FEBS J》、《Genomics》、《Animal Frontiers》、《BMC Genomics》、《BMC Genetics》、《Scientific Reports》、《Animal Genetics》、《Animal》、《Gene》、《Journal of Animal Science》、《畜牧兽医学报》、《中国畜牧杂志》、《中国农业科学》、《遗传》等SCI期刊及中文核心期刊审稿专家

1.动物健康与疾病的遗传及表观遗传调控机制

2.奶牛隐性/临床乳房炎风险评估及应用

3.畜禽表观遗传修饰的代间传递规律及在抗病遗传育种中的应用

本科生课程：近十年课程数据
研究生课程：近十年课程数据

纵向项目 横向项目

论文题目	刊物名称	收录类别	发表年月	第一作者或全部作者	第一作者单位	排名

英文（* 通讯作者，#同等贡献作者）：

1.     Siqian Chen#, Shuli Liu#, Shaolei Shi#, Hongwei Yin, Yongjie Tang, Jinning Zhang, Wenlong Li, Gang Liu, Kaixing Qu, Xiangdong Ding, Yachun Wang, Jianfeng Liu, Shengli Zhang, Lingzhao Fang,* and Ying Yu*. Cross-Species Comparative DNA Methylation Reveals Novel Insights into Complex Trait Genetics among Cattle, Sheep, and Goats. Mol. Biol. Evol. 2024,41(2): msae003 https://doi.org/10.1093/molbev/msae003

2.     Yongjie Tang, Jinning Zhang, Wenlong Li, Xueqin Liu, Siqian Chen, Siyuan Mi, Jinyan Yang, Jinyan Teng, Lingzhao Fang* and Ying Yu* Identification and characterization of whole blood gene expression and splicing quantitative trait loci during early to mid- lactation of dairy cattle, BMC Genomics. 2024, 25:445. https://doi.org/10.1186/s12864-024-10346-7

3.     Jinyan Yang, Siqian Chen, Fuping Ma, Ning Ding, Siyuan Mi, Qingyao Zhao, Yue Xing, Ting Yang, Kai Xing, Ying Yu* & Chuduan Wang*. Pathogen stimulations and immune cells synergistically affect the gene expression profile characteristics of porcine peripheral blood mononuclear cells, BMC Genomics, 2024, 25:719.  https://doi.org/10.1186/s12864-024-10603-9

4.     Yue Xing, Yongjie Tang, Quanzhen Chen, Siqian Chen, Wenlong Li, Siyuan Mi,*and Ying Yu,* The role of RNA epigenetic modification-related genes in the immune response of cattle to mastitis induced by Staphylococcus aureus. Anim Biosci 37(7):1141-1155. July 2024 https://doi.org/10.5713/ab.23.0323

5.     Jinning Zhang, Xueqin Liu, Tahir Usman, Yongjie Tang, Siyuan Mi, Wenlong Li, Mengyou Yang, and Ying Yu,* Integrated analysis of transcriptome and milk metagenome in subclinical mastitic and healthy cows. Animal Bioscience. 2022. Accepted, 2024 published. 

6.  Xiao Wang^#, Wenlong Li^#, Xia Feng, Jianbin Li, George E. Liu, Lingzhao Fang* and Ying Yu*. Harnessing male germline epigenomics for the genetic improvement in cattle. Journal of Animal Science and Biotechnology, 2023, 14:76.

7.     Wenlong Li, Siyuan Mi, Jinning Zhang, Xueqin Liu, Siqian Chen, Shuli Liu, Xia Feng, Yongjie Tang, Yanhua Li, Lin Liu, Lingzhao Fang, Shengli Zhang, and Ying Yu*. Integrating sperm cell transcriptome and seminal plasma metabolome to analyze the molecular regulatory mechanism of sperm motility in Holstein stud bulls. 2023, Journal of Animal Science, 2023, 101, 1–15.

8.     Xueqin Liu, Siyuan Mi, Wenlong Li, Jinning Zhang, Serafino M. A. Augustino, Zhichao Zhang, Ruiqiang Zhang, Wei Xiaoand Ying Yu*. Molecular regulatory mechanism of key LncRNAs in subclinical mastitic cows with folic acid supplementation. BMC Genomics, 2023, 24:464.

9.  Qingyao Zhao, Qinglei Xu, MA. Serafino, Qin Zhang, Chuduan Wang* and Ying Yu*. Comprehensive analysis of circular RNAs in porcine small intestine epithelial cells associated with susceptibility to Escherichia coli F4ac diarrhea, BMC Genomics, 2023, 24:211

10.   Chen S, Liu S, Shi S, Jiang Y, Cao M, Tang Y, Liu J, Fang L*, Yu Y* and Zhang S. Comparative epigenomics reveals the impact of ruminant-specific regulatory elements on complex traits[J]. BMC Biology 20, 273 (2022). doi:10.1186/s12915-022-01459-0. 

11.   Q. Z. Chen#, M. Y. Yang#, X. Q. Liu, J. N. Zhang, S. Y. Mi, Y. J. Wang, W. Xiao, and Y. Yu* Blood transcriptome analysis and identification of genes associated with supernumerary teats in Chinese Holstein cows. Journal of Dairy Science. 2022. S0022-0302(22)00591-4. https://doi.org/10.3168/jds.2022-22346 

12.   Muhammad Zahoor Khan#, Gerile Dari#, Adnan Khan , Ying Yu*. Genetic polymorphisms of TRAPPC9 and CD4 genes and their association with milk production and mastitis resistance phenotypic traits in Chinese Holstein. Frontiers in Veterinary Science. 2022, 9:1008497. https://doi.org/10.3389/fvets.2022.1008497. 

13.   Jinyan Yang, Yongjie Tang, Xueqin Liu, Jinning Zhang, Muhammad Zahoor Khan, Siyuan Mi, Chuduan Wang, Ying Yu*. Characterization of Peripheral White Blood Cells Transcriptome Profiles to Unravel the Regulatory Signatures of Bovine Subclinical Mastitis Resistance. Frontiers in Genetics. 2022. 13:949850. doi: 10.3389/fgene.2022.949850. 

14.   Siyuan Mi^#, Yuanjun Shi^#, Gerile Dari, and Ying Yu*. Function of m6A and its regulation of domesticated animals’ complex traits. Journal of Animal Science, 2022, 11(6): 1-14. https://doi.org/10.1093/jas/skac034 

15.   Shuli Liu#, Yahui Gao#, Oriol Canela-Xandri#, Sheng Wang#, Ying Yu#, George E. Liu*, Albert Tenesa*, Lingzhao Fang*. A multi-tissue atlas of regulatory variants in cattle. Nature Genetics. 2022. 54(9):1438-1447. https://doi.org/10.1038/ s41588-022-01153-5. (Cover Article)

16.   Mi SY^#, Tang YJ^#, Shi LY, Liu XQ, Si JF, Yao YL, Augustino SMA, Fang LZ, Yu Y*. Protective roles of folic acid in the responses of bovine mammary epithelial cells to different virulent Staphylococcus aureus strains. Biology, 2021, 10, 1164. https://doi.org/10.3390/biology10111164 

17.   Mi SY^#, Chen SQ^#, Li WL, Fang LZ, Yu Y*. Effects of sperm DNA methylation on domesticated animal performance and perspectives on cross-species epigenetics in animal breeding, Animal Frontiers, 2021, 11(6): 39-47. doi: 10.1093/af/vfab053. 

18.   Siyuan Mi, Yongjie Tang, Darigerile, Yuanjun Shi, Jinning Zhang, Hailiang Zhang, Xueqin Liu, Yibing Liu, Usman Tahir, Ying Yu*. Transcriptome sequencing analysis for the identification of stable lncRNAs associated with bovine Staphylococcus aureus mastitis, Journal of Animal Science and Biotechnology. 2021, 12(1):120. doi.org/10.1186/s40104-021-00639-2 

19. Ying Yu, Siqian Chen, Shuli Liu, Lingzhao Fang, Shengli Zhang. Studies of sperm DNA methylation variations and their potential regulations on production and reproduction traits in cattle and pigs. Journal of Animal Science, 2021. 99(S3): 88. 

20. Serafino M. A. Augustino, Qinglei Xu, Xueqin Liu, Siyuan Mi, Liangyu Shi, Yibing Liu, Hui Wen, Di Wang, Lei Liu, Qin Zhang and Ying Yu*. Integrated analysis of lncRNAs and mRNAs reveals key trans-target genes associated with ETEC-F4ac adhesion phenotype in porcine small intestine epithelial cells, BMC Genomics, 2020, 21:780. https://doi.org/10.1186/s12864-020-07192-8.

21.   Di Wang, Lei Liu, Serafino M.A. Augustino, Tao Duan, Thomas J. Hall, David E. MacHugh, Jinhuan Dou, Yi Zhang, Yachun Wang, Ying Yu*. Identification of novel molecular markers of mastitis caused by Staphylococcus aureus using gene expression profiling in two consecutive generations of Chinese Holstein dairy cattle, Journal of Animal Science and Biotechnology. 2020, 11, 98.

22.   Muhammad Zahoor Khan, Adnan Khan, Jianxin Xiao, Jinhuan Dou, Lei Liu and Ying Yu*. Overview on folic acid supplementation alone or in combination with vitamin B12 in dairy cattle during periparturient period. Metabolites, 2020, 10(6):263.

23.   Serafino M. A. Augustino, Qinglei Xu, Xueqin Liu, Lei Liu, Qin Zhang, Ying Yu*. Transcriptomic Study of Porcine Small Intestine Epithelial Cells Reveals Important Genes and Pathways Associated With Susceptibility to Escherichia coli F4ac Diarrhea. Frontiers in Genetics, 2020, 2: 68. doi: 10.3389/fgene.2020.00068. 

24.   Muhammad Zahoor Khan, Lei Liu, Zhichao Zhang, Adnan Khan, Di Wang, Siyuan Mi, Tahir Usman, Gang Liu, Gang Guo, Xizhi Li, Yachun Wang, Ying Yu*. Folic acid supplementation regulates milk production variables, metabolic associated genes and pathways in perinatal Holsteins, J Anim Physiol Anim Nutr (Berl), 2020, 104(2): 483-492. 

25.   Khan MZ, Zhang Z, Liu L, Wang D, Mi S, Liu X, Liu G, Guo G, Li X, Wang Y, Yu Y*. Folic acid supplementation regulates key immunity-associated genes and pathways during the periparturient period in dairy cows. Asian-Australasian Journal of Animal Sciences (AJAS), 2020, 00:1-13 doi:10.5713/ajas.18.0852.

26.   Di Wang, Yiyuan Wei, Liangyu Shi, Muhammad Zahoor Khan, Lijun Fan, Yachun Wang, and Ying Yu*. Genome-wide DNA methylation pattern in a mouse model reveals two novel genes associated with Staphylococcus aureus mastitis. Asian-Australasian Journal of Animal Sciences (AJAS), 2020, 33(2):203-211. doi: 10.5713/ajas.18.0858 

27.   Lei Liu, Di Wang, Siyuan Mi, Zhongyi Duan, Shuang Yang, Jiuzhou Song, Guiyun Xu, Ning Yang, and Ying Yu*. The different effects of viral and bacterial mimics maternal stimuli on ethology of hens and reproduction of their offspring. Poultry Science, 2019, 98(9):4153-4160. doi: 10.3382/ps/pez189.

28.   Khan MZ, Wang D, Liu L, Usman T, Wen H, Ruiqiang Z, Liu SL, Shi LY, Mi SY, Xiao W, Yu Y*. Significant genetic effects of JAK2 and DGAT1 mutations on milk fat content and mastitis resistance in Holsteins, Journal of Dairy Research, 2019. 86(4):388-393. doi.org/10.1017/S0022029919000682

29.   Bo Wang, Heqiong Li, Zhen Li, Luyang Jian, Yuefeng Gao, Yanghua Qu, Ce Liu, Chenchen Xu, Yuxia Li, Zhicheng Diao, Wei Lua, Ying Yu*, Zoltan Machatyb, Hailing Luoa*. Maternal folic acid supplementation modulates the growth performance, muscle development and immunity of Hu sheep offspring of different litter size. Journal of Nutritional Biochemistry, 2019, 8. Doi:10.1016/j.jnutbio.2019.05.011

30.   Fengxia Zhang, Ting Yang, Hong Ao, Liwei Zhai, Zhen Tan, Yuan Wang, Kai Xing, Xitong Zhao, Zhiquan Wang, Ying Yu*, Chuduan Wang*. Novel nucleotide variants in SLA-DOB and CD4 are associated with immune traits in pregnant sows. Gene, 2019,4. Doi:10.1016/j.gene.2019.04.057. 

31.   Jinhuan Dou, Hanpeng Luo, Abdul Sammad, Wenqi Lou, Di Wang, Flavio Schenkel, Ying Yu*, Lingzhao Fang4*, Yachun Wang*. Epigenomics of rats’ liver and its cross-species functional annotation reveals key regulatory genes underlying short term heat-stress response. Genomics. 2022, 114: 110449. https://doi.org/10.1016/j.ygeno.2022.110449 (IF 4.380, Aug.) 

32.   Jinning Zhang , Wenlong Li, Yongjie Tang, Xueqin Liu, Hailiang Zhang, Yueling Zhou, Yachun Wang , Wei Xiao*, and Ying Yu ,* Testing two somatic cell count cutoff values for bovine subclinical mastitis Detection Based on Milk Microbiota and Peripheral Blood Leukocyte Transcriptome Profile. Animals. 2022, 12: 1694. https://doi.org/10.3390/ani12131694

33.   H. Wen, H. Luo, M. Yang, S. M. A. Augustino, D. Wang, S. Mi, Y. Guo, Y. Zhang, W. Xiao, Y. Wang*, Y. Yu*. Genetic parameters and weighted single-step genome-wide association study for supernumerary teats in Holstein cattle. J. Dairy Sci. 2021 Nov;104(11):11867-11877 https://doi.org/10.3168/jds.2020-19943.

34.   Siqian Chen, Shuli Liu, Siyuan Mi, Wenlong Li, Shengli Zhang, Xiangdong Ding^*, Ying Yu^*. Comparative analyses of sperm DNA methylomes among three commercial pig breeds reveal vital hypomethylated regions associated with spermatogenesis and embryonic development. Frontiers in Genetics. 2021 Oct 6;12:740036.  doi: 10.3389/fgene.2021.740036.  eCollection 2021. 

35.   Fengxia Zhang, Siqian Chen, Ting Yang, Hong Ao, Liwei Zhai, Qianjun Li, Kai Xing, Yibing Liu, Huatao Liu, Ying Yu*, Chuduan Wang*. Novel DNA methylation markers of PRRSV-specific antibodies and their intergenerational transmission from pregnant sows to piglets. Gene. 2021. 801, 145831. https://doi.org/10.1016/j.gene.2021.145831

36.   Shuli Liu, Siqian Chen, Wentao Cai, Hongwei Yin, Aoxing Liu, Yanhua Li, George E. Liu, Yachun Wang, Ying Yu*,and Shengli Zhang*. Divergence Analyses of Sperm DNA Methylomes between Monozygotic Twin AI Bulls. Epigenomes, 2019, 21(3):21-38. (Cover Article)

37.   Liu L, Yang N, Xu GY, Liu SL, Wang D, Song JZ, Duan ZY, Yang S, Yu Y*.Transgenerational transmission of maternal stimulatory experience in domesticated birds. The FASEB Journal, 2018.12:7002-7017. doi: 10.1096/fj.201800762RR

38.   Tahir Usman^#, Yachun Wang^#, Chao Liu^#, Yanghua He, Xiao Wang, Yichun Dong, Hongjun Wu, Airong Liu, Ying Yu*. Novel SNPs in IL-17F and IL-17A genes associated with somatic cell count in Chinese Holstein and Inner-Mongolia Sanhe cattle, Journal of Animal Science and Biotechnology. 2017, 8:5. doi: 10.1186/s40104-016-0137-1. 

39.   Song M, He Y, Zhou H, Zhang Y, Li X, Yu Y*. Combined analysis of DNA methylome and transcriptome reveal novel candidate genes with susceptibility to bovine Staphylococcus aureus subclinical mastitis. Sci. Rep. 2016, 6:29390. doi: 10.1038/srep29390. 

40.   He Y, Song M, Zhang Y, Li X, Song J, Zhang Y, Yu Y*. Whole-genome regulation analysis of histone H3 lysin 27 trimethylation in subclinical mastitis cows infected by Staphylococcus aureus. BMC Genomics. 2016, 17:565. doi: 10.1186/s12864-016-2947-0.

41.   Lingzhao Fang, Yali Hou, Jing An, Bingjie Li, Minyan Song, Xiao Wang, Peter Sørensen, Yichun Dong, Chao Liu, Yachun Wang, Huabin Zhu, Shengli Zhang and Ying Yu*. Genome-wide Transcriptional and Post-transcriptional Regulation of Innate Immune and Defense Responses of Bovine Mammary Gland to Staphylococcus aureus. Front. Cell. Infect. Microbiol. 2016, doi: 10.3389/fcimb.2016.00193. online published. 

42.   Shen JY, Zhou CL, Zhu SE, Shi WQ, Hu MS, Fu XW, Wang CD, Wang YC, Zhang Q, Ying Yu* Comparative transcriptome analysis reveals early pregnancy-specific genes expressed in peripheral blood of pregnant sows PLoS ONE, 2014 Dec 5;9(12):e114036. 

43.   Usman T, Wang Y, Liu C, Wang X, Zhang Y. and Yu Y.*Association study of single nucleotide polymorphisms in JAK2 and STAT5B genes and their differential mRNA expression with mastitis susceptibility in Chinese Holstein cattle. Animal Genetics. 2015, 46(4):371-380. 

44.   Wang X, Ma PP, Liu JF, Zhang Q, Zhang Y, Ding XD, Jiang L, Wang YC, Zhang Y, Sun DX, Zhang SL, Su GS and Yu Y*. Genome-wide association study in Chinese Holstein cows reveal two candidate genes for somatic cell score as an indicator for mastitis susceptibility. BMC Genetics. 2015, 16:111.

45.   Wang X, Wang X, Wang Y, Guo G, Usman T, Hao D, Tang X, Zhang Y, Yu Y*. Antimicrobial Resistance and Toxin Genes Profiles of Staphylococcus aureus Strains from Holstein Milk. Letters in Applied Microbiology. 2014, 58(6):527-34（Jan 25, 4DOI: 10.1111/lam.12221.）

46.   Liu X , Usman T, Wang YC, Zezhao Wang, Xianzhou Xu, Meng Wu, Yi Zhang, Xu Zhang, Qiang Li, Lin Liu, Wanhai Shi, Chunhua Qin, Fanjun Geng, Congyong Wang, Rui Tan, Xixia Huang, Airong Liu, Hongjun Wu, Shixin Tan, Yu Y*. Polymorphisms in Epigenetic and Meat Quality Related Genes in Fourteen Cattle Breeds and Association with Beef Quality and Carcass Traits. Asian-Australasian Journal of Animal Sciences (AJAS) 2015; 28(4): 467-475. DOI: http://dx.doi.org/10.5713/ajas.13.0837

47.   Yang J, Yu Y*, Yao J, Chen Y, Xu G, Yang N, Sun D, Zhang Y. Molecular identification of avian leukosis virus subgroup E loci and tumor virus B locus in Chinese indigenous chickens. Poult Sci. 2011, 90(4):759-65. 

48.   Ziqing Weng, Chunxi Huang, Juan Shu, Qin Zhang, Ying Yu* Effects of Heat Shock on Viability and Fecundity in Tribolium castaneum. 2011. 5th International Conference on Bioinformatics and Biomedical Engineering. CXP-1072938. 31306. (EI)

49.   Xiaoshuo Wang, Hong Ao, Minyan Song, Lijing Bai, Weiyong He, Chuduan Wang*, Ying Yu*. Identification of DNA methylation regulated novel host genes relevant to inhibition of virus replication in porcine PK15 cell using double stranded RNA mimics and DNA methyltransferase inhibitor. Genomics. 2019, 2019 Dec;111(6):1464-1473. doi: 10.1016/j.ygeno.2018.09.020.

50.   Zhao PJ^#, Yu Y^#, Feng W, Du H, Yu J, Kang HM, Zheng XR, Wang ZQ, Liu GE, Ernst CW, Ran XQ, Wang JF, Liu JF*. Evidence of evolutionary history and selective sweeps in the genome of Meishan pig reveals its genetic and phenotypic characterization. GigaScience, 2018, 7: 1-22. 

51.   Yang T, Zhang FX, Zhai LW, He WY, Tan Z, Sun YY, Wang Y, Liu L, Ning C, Zhou WL, Ao H, Wang CD*, Yu Y*. Transcriptome of porcine PBMCs over two generations reveals key genes and pathways associated with variable antibody responses post PRRSV vaccination. Sci. Rep. 2018, 8: 2460.

52.   He Y. Yu Y*. Zhang Y*. Song J, Mitra A, Zhang Y, Wang Y, Sun D, Zhang S. Genome-wide Bovine H3K27me3 Modifications and the Regulatory Effects on Genes Expressions in Peripheral Blood Lymphocytes. PLoS ONE. 2012. 6, e39094.

53.   Zhou C, Liu Z, Jiang J, Yu Y*, Zhang Q*. Differential gene expression profiling of porcine 3 epithelial cells infected with three 4 enterotoxigenic Escherichia coli strains. BMC Genomics. 2012, 13:330.

54.   Zhou C, Liu Z, Liu Y, Fu W, Ding X, Liu J, Yu Y*, Zhang Q*，Gene Silencing of Porcine MUC13 and ITGB5: Candidate Genes towards Escherichia coli F4ac Adhesion，PLoS ONE，2013, 8(7): e70303

55.   Wang XS, Ao H, Zhai LW, Bai LJ, He WY, Yu Y*, Wang CD*，Genome-wide Effects of DNA Methyltransferase Inhibitor on Gene Expression in Double-stranded RNA Transfected Porcine PK15 Cells，Genomics，2014, 103(5-6):371-379. 

56.   Xiaoshuo Wang, Hong Ao, Minyan Song, Lijing Bai, Weiyong He, Chuduan Wang*, Ying Yu*. Identification of DNA methylation regulated novel host genes relevant to inhibition of virus replication in porcine PK15 cell using double stranded RNA mimics and DNA methyltransferase inhibitor. Genomics, 2018,10. doi:10.1016/j.ygeno.2018.09.020 

57.   Tahir Usman*, Nawab Ali, Yachun Wang and Ying Yu* Association of Aberrant DNA Methylation Level in the CD4 and JAK-STAT-Pathway-Related Genes with Mastitis Indicator Traits in Chinese Holstein Dairy Cattle, Animals. 2021. 12(1):65. doi: 10.3390/ani12010065. 

58.   Yu Y, Luo J, Mitra A, Chang S, Tian F, Zhang H, Yuan P, Zhou H, Song J. Temporal transcriptome changes induced by MDV in marek's disease-resistant and -susceptible inbred chickens. BMC Genomics. 2011, 12:501.

59.  Yu Y, Zhang HM, Byerly MS, Bacon L, Porter TE, Liu GE, Song JZ. Alternative splicing variants and DNA methylation status of BDNF in inbred chicken lines. Brain Research. 2009, 5(1269): 1-10. 

60. Yu Y, Zhang HM, Tian F, Bacon L, Zhang Y, Zhang WS, Song JZ. Quantitative evalution of DNA methylation patterns for ALVE and TVB genes in a neoplastic disease susceptible and resistant chicken model. PLoS ONE. 2008. 3: e1731. 

61. Yu Y, Zhang HM, Tian F, Zhang WS, Fang HB, Song JZ. An integrated epigenetic and genetic analysis of DNA methyltransferase genes (DNMTs) in tumor resistant and susceptible chicken lines. PLoS ONE. 2008. 3: e2672. 

62.  Yu Y, Lian LS, Wen JK, Shi XW, Zhu FX, Nie L, Zhang YP. Genetic diversity and relationship of Yunnan native cattle breeds and introduced beef cattle breeds. Biochem Genet. 2004，42(1-2):1-9.

63. Yu Y, Nie L, He ZQ, Wen JK, Jian CS, Zhang YP. Mitochondrial DNA variation in cattle of south China: origin and introgression. Anim Genet. 1999, 30(4):245-250.

中文（*通讯作者，#同等贡献作者）：

1.     赖婉仪, 陶欣月, 杨庚新, 余文莉, 李树静, Tahir Usman, 俞英*. 奶牛乳房健康基因检测芯片在中国荷斯坦牛及巴基斯坦本地奶牛群中的应用研究，畜牧兽医学报，2024-07-30

2.     吉虹锦, 冶倩楠, 李文龙, 李志鹏, 冯霞, 米思远, 史源钧, 张金柠, 郭健, 俞英*. 基于高叶酸小鼠睾丸转录组筛选牛繁殖力关键同源基因，中国畜牧兽医，2024,51(7):2751-2765.

3.     汪佳豪，赵卿尧，周月玲，史良玉，王楚端，俞英*. 基因芯片在畜禽遗传育种中的应用及展望, 遗传，2023, 45(12): 1114―1127.

4.     白云飞，赵婷婷, 李文龙, 邢悦, 任小丽, 郭刚, 俞英*. 奶牛乳房炎风险评估体系在中国南北方奶牛场的验证及应用, 中国畜牧兽医，2023,50(8):3267-3274.

5.     王语浓，唐永杰, 张雅丽, 苏峰, 张俊, 张毅, 王雅春, 俞英*. 农业反刍动物重要乳性状表型测定方法及研究进展，中国科学:生命科学, 2023, 53, doi: 10.1360/SSV-2022-0284.

6.     周月玲，达日格日乐，唐永杰，李文龙，文惠，赵婷婷，肖炜*，俞英*. 中国荷斯坦牛乳房炎抗性相关SNP效应扩群验证及分析. 2022 中国畜牧杂志 58:12

7.     史源钧，米思远，俞英*，m6A表观遗传修饰及其调控机制研究进展，中国畜牧兽医，2022，49（1），197-207.

8.     杨金艳，刘雪琴，文天琦，孙愉洪，俞英*，lncRNA调控畜禽抗病力性状研究进展，遗传，2021，43（7）：654-664.

9.     刘雪琴，王迪，米思远，张瑞强，史良玉，俞英* 叶酸补饲对隐性乳房炎奶牛免疫力及产奶性状相关基因表达的影响，畜牧兽医学报，2020，51（11）: 2731-2742.

10.   史良玉，李文龙，唐永杰，米思远，肖  炜，刘林，张  毅，王雅春，俞英* 中国荷斯坦牛乳房炎风险评估模型建立及预测分析，中国畜牧杂志，2021，57（3）：84-90.

11.   文惠，罗汉鹏，米思远，刘雪琴，王雅春，肖炜，俞英*. 副乳头对奶牛生产性能的影响及其相关基因LGR5遗传变异及表达分析，中国畜牧兽医，2019，46（12）：3642-3649.

12.   唐永杰,米思远,刘磊,王明月,赵春芳,连玲,徐桂云,杨宁,俞英*.细胞色素P450通路GSTAL2基因在蛋鸡脾脏及MSB-1细胞中的继代表达传递现象[J].中国家禽, 2019, 41(18):6-13.

13.   张志超,陈思倩,刘刚,黄烁,王倩倩,郭刚,李锡智,王雅春,张胜利,俞英*.围产期奶牛饲喂包被叶酸对早期产奶性能的影响[J].中国奶牛, 2019(05):11-14.

14.   米思远，师科荣，张瑞强，张海亮，徐庆磊，俞英*. 牛病毒性腹泻病毒的RT-PCR检测及感染犊牛相关基因差异表达分析，畜牧兽医学报，2018，49 (7): 1432-1439.

15.   史良玉，张瑞强，李想，Serafino Musa Abdelkarim Augustino，Muhammad Zahoor Khan，刘林，肖炜，唐韶青，张毅，王雅春，俞英*. 北京地区中国荷斯坦牛体细胞评分差值变化规律及遗传力估计，畜牧兽医学报，2018, 49(5):935-941.

16.   张瑞强，史良玉，王迪，米思远，张毅，丁向东，唐韶青，肖炜，俞英*. 京津冀地区中小规模奶牛场隐性乳房炎状况调查，中国奶牛, 2018, 4: 65-69.

17.   王晓，张勤，俞英*，基于体细胞评分的中国荷斯坦牛乳房炎抗性全基因组关联分析，中国农业科学，2017，50（4）：755-763.

18.   刘舜齐,冯文,徐小辉,俞英*. 娟姗牛在南方高温高湿环境下的生产性能分析，中国奶牛，2017,7: 18-21.

19.   宋敏艳，韦艺媛，Khattak Zahoor，王新，俞英*. 耐甲氧西林金黄色葡萄球菌诱导牛乳腺上皮细胞炎症反应的分子标志物研究, 畜牧兽医学报，2016，47（10）：1995-2002.

20.   宋敏艳，俞英*. 畜禽表观遗传学主要研究领域及研究进展，中国畜牧兽医，2016，43（10）：2701-2709.

21.   冯文，董易春，王晓，刘超，王新，王雅春，俞英*. TRAPPC9基因对奶牛金葡菌乳房炎抗性性状的遗传效应. 畜牧兽医学报，2016，47（2）：276-283.

22.   张志超，王雅春，俞英*. 德系西门塔尔牛与荷斯坦牛产奶性状及血清细胞因子比较研究，中国畜牧杂志，2016，52（17）：1-4.

23.   王迪，王晓，王泽昭，王雅晶，王雅春，俞英*. 奶牛乳房炎抗性研究文献综合分析，中国奶牛，2016，7: 22-25.

24.   董易春，刘超，王晓，王雅春，张毅，孙东晓，张胜利，张勤，张沅，俞英*，基于GWAS后分析策略研究TRAPPC9基因对奶牛产奶性状的遗传效应，畜牧兽医学报，2015,46（1）：60-68.

25.   王晓，俞英*. 中国北方奶牛金葡菌乳房炎感染现状及耐药性和流行类型研究进展，畜牧兽医学报，2015,46（9）：1477-1488.

26.   钱梦樱，乔婕，王晓，董易春，王雅春，张毅，张胜利，孙东晓，俞英*，使用SCC差值法分析北方中国荷斯坦牛场奶牛生产状况，中国奶牛，2015,13:18-22.

27.   安晶，王晓，王新，郭刚，王雅春，俞英*，荷斯坦牛乳源金黄色葡萄球菌流行性及其与乳源总菌群的耐药性分析，中国畜牧兽医，2014，41（10）：278-283.

28.   王晓，王新，郝丹，唐晓双，周传丽，王雅春，张胜利，张沅，俞英*. 奶牛乳源大肠杆菌耐药性、毒素基因鉴定及PFGE分型研究，畜牧兽医学报，2014, 45 (3):463-475.

29.   王晓，冯文，解小莉，张旭，李海峰，姜立新，袁鹏，吴宏军，刘爱荣，王雅春，俞英*，三河牛乳房外观洁净度评分体系的研究，家畜生态学报，2014,35（12）：63-69.

30.   冯文，王晓，王雅春，刘爱荣，吴宏军，俞英*，内蒙古三河牛体细胞数与产奶量的关系，中国牛业科学，2013，184（39）：309-313.

31.   刘超，韩邑平，俞英*. 北京市猪肉消费市场调查分析. 中国畜牧杂志，2012, 8, 10-13.

32.   刘超，沈君叶，朱士恩，史文清，张涛，高雪桃，俞英*，FSH-β、ESR、BF基因多态性对大白猪繁殖性状的效应，中国畜牧杂志，2013，17：6-11.

33.   王晓，王新，王雅春，张胜利，张沅，刘超，郝丹，唐晓双，卢振峰，Miro Ferreri，俞英*. 生产群奶牛金葡菌毒素基因检测及PFGE分型研究. 中国奶牛，2013，4：8-13.

34.   沈君叶, 俞英*, 王茜, 马裴裴, 朱士恩, 史文清, 王雅春, 张勤. 母猪繁殖力性状影响因素分析及遗传参数估计, 遗传，2012, 34(5): 591―596.

35.   俞英，邓奕妮，牛疾病相关基因的DNA变异及遗传控制，遗传，2012,10:1242-1250.

36.   韦艺媛，俞英*. 奶牛乳房炎检测方法与分子抗病育种研究进展, 中国奶牛，2011,8: 52-58.

37.   俞英, 王栋, 孙东晓, 徐桂云, 李俊英, 张沅. 鸡L-FABP基因全长cDNA克隆表达及与杂种鸡脂肪沉积的关系. 遗传，2011,7：763-767.

38.   王晓铄，俞英*. 表观遗传对炎症的调控机制及其在奶牛乳房炎抗病育种中的应用前景，遗传，2010, 32: 663-669.

39.   俞英，张沅. 畜禽遗传评定方法的研究进展，遗传. 2003, 5: 607~610.

40.   张丰霞，翟丽维，刘怡冰，敖红，李千军，杨婷，杨金艳，刘华涛，邢凯，石咏，马福平，李航，俞英*，王楚端*，沉默NQO1 抑制 PRRSV 复制的作用研究，中国畜牧杂志（2021年猪业科技专刊），2021

41.   李文龙^#，赵婷婷^#，达日格日乐，史良玉，郭刚，王雅春，肖炜*，俞英*，肖炜奶牛乳房炎风险评估体系在中国荷斯坦牛群中的应用及优化，中国畜牧杂志，2021，10. 

42.   张丰霞，杨婷，敖红，谭振，邢凯，翟丽维，俞英*，王楚端*，SLA-DOB及CD4基因新突变显著影响长白妊娠母猪的血常规性状，畜牧兽医学报，2017，11: 2046-2058.

43.   刘姝丽， 张胜利*， 俞英*. 同卵双胞胎在复杂性状DNA甲基化调控机制研究中的应用，遗传，2016 Vol. 38 (12)：1043-1055.

44.   周传丽，刘铮铸，俞英*，张勤*. F4ac 产肠毒素大肠杆菌菌液上清对仔猪小肠上皮细胞的免疫刺激作用. 中国农业科学, 2014, 47(4): 779-785

45.   周传丽，刘铮铸，俞英*，张勤*. 仔猪小肠黏膜上皮细胞体外分离培养及鉴定. 中国农业科学, 2011, 44(21):4516-4524.

46.   董易春，刘铮铸，周传丽，潘登科，张 勤*，俞 英*，转抗仔猪腹泻候选基因FUT1克隆猪的效率分析及分子鉴定，中国畜牧杂志，2014,50( 9): 1-5.

47.   窦金焕，李仲淑*，王雅春，董易春，周传丽，刘铮铸，张勤, 俞英*，转抗仔猪腹泻基因FUT1克隆猪印记基因IGF2的表达分析，中国畜牧兽医，2014, 41(12): 255-260.

48.   王晓铄，俞英（并列第一），刘会杰，肖丽，翟立维，敖红，王楚端*，基于表达谱芯片挖掘抗猪瘟病毒相关基因及其在不同猪瘟抗体水平下的表达差异, 畜牧兽医学报，2014, 45 (1):14-22.

49.   王晓，解小莉，王胜，钱梦樱，马裴裴，张沅，孙东晓，刘剑锋，丁向东，姜力，王雅春，张毅，张胜利，张勤*，俞英*，中国荷斯坦牛乳房炎易感性及抗性的全基因组关联分析，畜牧兽医学报，2013，12：1907-1912.

50.   樊利军，张梦泽，韦艺媛，卢胜明，王小珂，王珑，姚毅，王雅春*，俞英*. 奶牛金黄色葡萄球菌乳腺炎小鼠模型的建立. 实验动物科学，2011，28（6）：1-6.

51.   何阳花, 俞英*, 张沅*. 拷贝数变异与疾病的关系及其在动物抗病育种中的应用前景. 遗传, 2008, 11: 1385-1391.

52.   马裴裴，俞英*，张沅*，张勤，王雅春，孙东晓，张毅. 中国荷斯坦牛SCC变化规律及其与产奶性状之间的关系，畜牧兽医学报，2010，41:1529-1535.

53.   俞英，王雅春，孙东晓，张毅，张沅. 动物育种教学新体系的建立与探索. 教育教学论坛. 2010，36：111-112.

54.   韦艺媛，王新，郝斐，俞英*. 奶牛乳房炎致病型耐甲氧西林金黄色葡萄球菌的分离鉴定，中国乳业，2011，1: 50-51.

55.   徐庆磊,Serafino M.A.Augustino,米思远,王雅春,黄锡霞,张勤,俞英*. ITGB5和MUC13基因在产肠毒素大肠杆菌抗性和易感大白仔猪间的差异表达分析[J].中国畜牧杂志,2019,55(02):39-44.

56.   王晓铄，赵会敏，唐天，李凯，钱旭，张雪，图雅，郑云胜，王怀栋，俞英*. CD4基因的DNA甲基化修饰在家畜抗病育种中的应用，畜牧兽医学报，2017，48（10）：1796-1806.

57.   田月珍，冯文，王雅春，黄锡霞*，俞英*. 新疆褐牛乳中体细胞数与产奶性状的影响因素分析，中国农业科学，2016，49（12）：2437-2448.

58.   解小莉, 俞英*, 袁志发, 杨洁, 马裴裴, 李迪超, 尉守科, 安峰, 封晓静, 张沅. 奶牛产奶性状与乳房炎相关基因CpG 含量及分布特征的比较分析，遗传，2012，34(4): 437―444. （非第一单位，通讯作者）

59.   百合地开力地·胡达拜尔地，冯文，刘超，黄锡霞，俞英*，新疆伊宁市牛肉消费市场调查分析，中国畜牧兽医，2015, 42 (2): 503-508（非第一单位，通讯作者）

60. 王新，韦艺媛，张静，周婷，梁珍娟，杨保伟，席美丽，夏效东，孟江洪*，俞英*. 乳房炎奶牛金黄色葡萄球菌毒素基因的检测及PFGE分型研究，畜牧兽医学报，2011. 7：974-980. 

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